Czech rail border crossings
These are all the Czech rail border crossings as of 2007. Crossings in italics are abandoned. The year of opening is in brackets.
Czech Republic – Austria
    

Summerau
Note that all of these railway lines were built in Austria-Hungary and became border crossings after the creation of Czechoslovakia in 1918.
- Břeclav - Bernhardsthal (1839), see North railway
 - Novosedly - Laa an der Thaya (1872-1930)
 - Hevlín - Laa an der Thaya (1870-1945)
 - Znojmo - Retz (1871)
 - Slavonice - Fratres (1903-1945)
 - České Velenice - Breitensee (1900-1950), narrow gauge
 - České Velenice - Gmünd (1869), see Franz Josef Railway
 - České Velenice - Gmünd (1902-1950), narrow gauge Waldviertelbahn to Groß Gerungs, remaining bridge across Lužnice leads to a border crossing for pedestrians
 - Horní Dvořiště - Summerau (1871)
 
Czech Republic – Germany
    

Re-opening of railway border crossing Potůčky-Johanngeorgenstadt in 1992
- Stožec - Haidmühle (1910-1945), currently 105 m long heritage railway only
 - Železná Ruda - Bayerisch Eisenstein (1877-1953, 1992), passenger transport only
 - Česká Kubice - Furth im Wald (1861)
 - Cheb - Waldsassen (1865-1945), currently a biking trail
 - Cheb - Schirnding (1883)
 - Aš - Selb - Plößberg (1865), reopened for passenger transport in December 2015
 - Hranice v Čechách - Adorf (1906-1945)
 - Vojtanov - Bad Brambach (1856)
 - Kraslice - Klingenthal (1886-1952, 2000), passenger transport only
 - Potůčky - Johanngeorgenstadt (1889-1945, 2003)
 - Vejprty - Bärenstein (1872-1945, 1993)
 - Křimov - Reitzenhain (1875-1947)
 - Moldava v Krušných Horách - Holzhau (1884-1945)
 - Děčín - Bad Schandau (1851)
 - Dolní Poustevna - Sebnitz (1905-1945), reopened in 2014
 - Rumburk - Ebersbach (1873)
 - Varnsdorf - Seifhennersdorf (1871), passenger transport only
 - Varnsdorf - Großschönau (1871), passenger transport only
 - Hrádek nad Nisou - Zittau (1859-1945, 1951), currently through Polish territory
 
Czech Republic – Poland
    

Abandoned track Harrachov-Jakuszyce

End of track in Otovice (2007)
Note that all these railway lines were built before the re-creation of Poland, so that some of them originally went to Germany, while others were entirely within the Austro-Hungarian empire.
- Heřmanice - Bogatynia (Reichenau) (1900-1945), narrow gauge, see Frýdlant-Heřmanice Railway
 - Frýdlant v Čechách - Zawidów (Seidenberg) (1875), transport of goods only
 - Jindřichovice pod Smrkem - Mirsk (Friedeberg) (1902-1945)
 - Harrachov - Jakuszyce (1902-1945, 2010–present), see Cog railway Tanvald-Harrachov and Izera railway
 - Královec - Lubawka (1869), regular traffic
 - Meziměstí - Mieroszów (1877)
 - Otovice - Tłumaczów (Tuntschendorf) (1889-1945)
 - Náchod-Běloves - Kudowa Zdrój (1945)
 - Lichkov - Międzylesie (1875)
 - Bernartice - Dziewiętlice (-1945)
 - Vidnava - Kałków (1911-1945)
 - Mikulovice - Głuchołazy (1888)
 - Jindřichov ve Slezsku - Głuchołazy (1875)
 - Krnov - Głubczyce (1873-1945)
 - Opava - Pilszcz (1909-1945)
 - Chuchelná - Krzanowice (1895-1945)
 - Bohumín - Chałupki (1848)
 - Petrovice u Karviné - Zebrzydowice (1855)
 - Albrechtice - Marklowice (1914-1931), abolished after enactment of border with Poland, only base of bridge across Olza remained
 - Český Těšín - Cieszyn (1888)
 
Czech Republic – Slovakia
    
Note that all of these railway lines were built before the dissolution of Czechoslovakia in 1993 and became border crossings in that year.
- Mosty u Jablunkova - Čadca (1871)
 - Horní Lideč - Lúky pod Makytou (1937)
 - Vlárský průsmyk - Horné Srnie (1888)
 - Velká nad Veličkou - Vrbovce (1929)
 - Sudoměřice - Skalica (1893), no regular traffic
 - Hodonín - Holíč (1891), currently no regular traffic, used for diversions in case of temporary closures on Lanžhot - Kúty line
 - Lanžhot - Kúty (1900)
 
Unrealised projects
    
- Nová Bystřice - Litschau (gauge 760 mm)
 - Moldava - Hermsdorf-Rehefeld, narrow gauge Pöbel Railway to Schmiedeberg on Weisseritz Railway
 - Dolní Světlá - Jonsdorf, extension of narrow gauge Zittau-Jonsdorf line
 - Hlučín - Chałupki (Annaberg)
 
References
    
(in Czech) Detailed article about abandoned border crossings
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